Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar kinase | A5CPYCFAH4_01490 | Q9X1I0 | Negative | 173256 - 174077 | 29343.3 |
| metallophosphatase | A5CPYCFAH4_01500 | Q9FMK9 | Negative | 174085 - 175068 | 35634.0 |
| glycoside hydrolase | A5CPYCFAH4_01510 | P94250 | Negative | 175106 - 176719 | 61907.2 |
| hypothetical protein | A5CPYCFAH4_01520 | P19406 | Negative | 176729 - 178660 | 70546.5 |
| endonuclease | A5CPYCFAH4_01530 | Q5B778 | Negative | 178670 - 179512 | 30775.2 |
| alpha-1 2-mannosidase | A5CPYCFAH4_01540 | O86365 | Negative | 179518 - 182535 | 110910.0 |
| hypothetical protein | A5CPYCFAH4_01550 | P45043 | Positive | 182748 - 183638 | 33450.6 |
| hypothetical protein | A5CPYCFAH4_01560 | P0ACI5 | Positive | 183544 - 183927 | 14687.0 |
| retaining alpha-galactosidase | A5CPYCFAH4_01570 | Q8A6L0 | Positive | 184052 - 186049 | 75367.8 |
| ribosome-binding atpase ychf | A5CPYCFAH4_01580 | P37518 | Positive | 186242 - 187342 | 39935.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
