Alistipes onderdonkii subsp. vulgaris

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes onderdonkii subsp. vulgaris is a Gram-negative, anaerobic bacterium known for its flagellar presence, which facilitates motility in anaerobic environments. This subspecies is characterized by having two replicons, indicating a complex genomic structure that may contribute to its adaptability in various ecological niches. The anaerobic nature of Alistipes onderdonkii subsp. vulgaris suggests it thrives in environments devoid of oxygen, such as the human gut, where it may play a role in the microbiome. Its ability to move using flagella could enhance its colonization potential and interaction with other microbial species in such habitats. This bacterium is cataloged under accession numbers AP019737.1 and AP019738.1, which are useful for researchers seeking to study its genetic makeup and functionality further. Understanding the traits and ecological role of Alistipes onderdonkii subsp. vulgaris may provide insights into its contributions to gut health and the overall microbiome, particularly in anaerobic conditions. Its presence in the gut microbiome could be linked to various health outcomes, highlighting the importance of anaerobic microorganisms in human health and disease.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes onderdonkii
Strainsubsp. vulgaris

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes onderdonkii subsp. vulgaris , Complete Genome

Gene Summary

Adenine Count

696267 bp

Thymine Count

695912 bp

Guanine Count

958181 bp

Cytosine Count

962313 bp

Genome Length

3312673 bp

Protein-coding Genes

2791 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
recombination protein recrA5CPYCFAH4_15410Q8A8T6Positive1824952 - 182554822295.9
malate dehydrogenaseA5CPYCFAH4_15420Q6L0C3Positive1825685 - 182668336214.8
hypothetical proteinA5CPYCFAH4_15430Not AvailableNegative1826762 - 182719015561.2
reactive intermediate/imine deaminaseA5CPYCFAH4_15440Q10121Positive1827267 - 182764112911.7
ribonucleoside-diphosphate reductase, adenosylcobalamin-dependentA5CPYCFAH4_15450Q9HI70Positive1827835 - 183038795695.9
membrane proteinA5CPYCFAH4_15460Q9S3R8Positive1830541 - 183174043160.9
hypothetical proteinA5CPYCFAH4_15470Not AvailableNegative1831844 - 183211610475.8
dna replication and repair protein recfA5CPYCFAH4_15480Q89ZW6Negative1832131 - 183351650051.2
hypothetical proteinA5CPYCFAH4_15490Not AvailablePositive1833755 - 183443824577.3
6,7-dimethyl-8-ribityllumazine synthaseA5CPYCFAH4_15500A6L8H3Positive1834448 - 183497819276.0

Displaying genes 1571 – 1580 of 5695 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.