Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | A5CPYCFAH4_15220 | P23620 | Negative | 1801055 - 1801735 | 25628.0 |
| cytochrome c4 | A5CPYCFAH4_15230 | Q9WYH8 | Negative | 1801829 - 1802893 | 39835.3 |
| prephenate dehydratase | A5CPYCFAH4_15240 | D3U717 | Negative | 1802931 - 1803776 | 30904.1 |
| hypothetical protein | A5CPYCFAH4_15250 | Not Available | Negative | 1803993 - 1804769 | 30511.1 |
| Trna-thr | Not Available | Not Available | Positive | 1805584 - 1805655 | Not Available |
| udp-glucose 4-epimerase | A5CPYCFAH4_15260 | Q4L3L8 | Positive | 1805763 - 1806719 | 35356.5 |
| hypothetical protein | A5CPYCFAH4_15270 | Not Available | Positive | 1806716 - 1807084 | 12939.5 |
| membrane protein | A5CPYCFAH4_15280 | P54567 | Positive | 1807094 - 1808053 | 36057.6 |
| hypothetical protein | A5CPYCFAH4_15290 | Not Available | Positive | 1808125 - 1808571 | 17124.4 |
| multidrug dmt transporter permease | A5CPYCFAH4_15300 | Q9ZPR7 | Negative | 1808701 - 1809702 | 35660.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
