Alistipes onderdonkii subsp. vulgaris

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes onderdonkii subsp. vulgaris is a Gram-negative, anaerobic bacterium known for its flagellar presence, which facilitates motility in anaerobic environments. This subspecies is characterized by having two replicons, indicating a complex genomic structure that may contribute to its adaptability in various ecological niches. The anaerobic nature of Alistipes onderdonkii subsp. vulgaris suggests it thrives in environments devoid of oxygen, such as the human gut, where it may play a role in the microbiome. Its ability to move using flagella could enhance its colonization potential and interaction with other microbial species in such habitats. This bacterium is cataloged under accession numbers AP019737.1 and AP019738.1, which are useful for researchers seeking to study its genetic makeup and functionality further. Understanding the traits and ecological role of Alistipes onderdonkii subsp. vulgaris may provide insights into its contributions to gut health and the overall microbiome, particularly in anaerobic conditions. Its presence in the gut microbiome could be linked to various health outcomes, highlighting the importance of anaerobic microorganisms in human health and disease.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes onderdonkii
Strainsubsp. vulgaris

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes onderdonkii subsp. vulgaris , Complete Genome

Gene Summary

Adenine Count

696267 bp

Thymine Count

695912 bp

Guanine Count

958181 bp

Cytosine Count

962313 bp

Genome Length

3312673 bp

Protein-coding Genes

2791 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-methyl-2-oxobutanoate hydroxymethyltransferaseA5CPYCFAH4_01390Q5LD96Negative161176 - 16196428302.3
rna methyltransferaseA5CPYCFAH4_01400Q72GI1Negative162237 - 16277319497.6
hypothetical proteinA5CPYCFAH4_01410Not AvailablePositive162861 - 16396441846.5
glutamine--trna ligaseA5CPYCFAH4_01420Q89KR6Positive163992 - 16566864468.6
glycosyl transferaseA5CPYCFAH4_01430P9WMY2Negative165780 - 16679337610.4
acetyltransferaseA5CPYCFAH4_01440P0ACV2Negative166780 - 16770037382.4
membrane proteinA5CPYCFAH4_01450Q58091Negative167716 - 16909550807.4
ribosomal rna small subunit methyltransferase iA5CPYCFAH4_01460P74038Negative169107 - 16981426084.5
hypothetical proteinA5CPYCFAH4_01470Not AvailableNegative169819 - 17138454061.3
hypothetical proteinA5CPYCFAH4_01480P49008Negative171539 - 17317360616.7

Displaying genes 141 – 150 of 5695 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.