Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | A5CPYCFAH4_01390 | Q5LD96 | Negative | 161176 - 161964 | 28302.3 |
| rna methyltransferase | A5CPYCFAH4_01400 | Q72GI1 | Negative | 162237 - 162773 | 19497.6 |
| hypothetical protein | A5CPYCFAH4_01410 | Not Available | Positive | 162861 - 163964 | 41846.5 |
| glutamine--trna ligase | A5CPYCFAH4_01420 | Q89KR6 | Positive | 163992 - 165668 | 64468.6 |
| glycosyl transferase | A5CPYCFAH4_01430 | P9WMY2 | Negative | 165780 - 166793 | 37610.4 |
| acetyltransferase | A5CPYCFAH4_01440 | P0ACV2 | Negative | 166780 - 167700 | 37382.4 |
| membrane protein | A5CPYCFAH4_01450 | Q58091 | Negative | 167716 - 169095 | 50807.4 |
| ribosomal rna small subunit methyltransferase i | A5CPYCFAH4_01460 | P74038 | Negative | 169107 - 169814 | 26084.5 |
| hypothetical protein | A5CPYCFAH4_01470 | Not Available | Negative | 169819 - 171384 | 54061.3 |
| hypothetical protein | A5CPYCFAH4_01480 | P49008 | Negative | 171539 - 173173 | 60616.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
