Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5CPYCFAH4_13750 | Not Available | Positive | 1603936 - 1604310 | 14804.4 |
| hypothetical protein | A5CPYCFAH4_13760 | P42720 | Positive | 1604427 - 1604693 | 9558.45 |
| hypothetical protein | A5CPYCFAH4_13770 | Not Available | Negative | 1604701 - 1605081 | 14341.4 |
| flavodoxin | A5CPYCFAH4_13780 | P61951 | Negative | 1605084 - 1605575 | 17168.9 |
| hypothetical protein | A5CPYCFAH4_13790 | Not Available | Positive | 1605793 - 1605981 | 6772.22 |
| collagen-binding protein | A5CPYCFAH4_13800 | Not Available | Positive | 1606061 - 1608586 | 95133.0 |
| hypothetical protein | A5CPYCFAH4_13810 | Not Available | Positive | 1608591 - 1608980 | 14670.7 |
| hypothetical protein | A5CPYCFAH4_13820 | Not Available | Positive | 1608983 - 1610485 | 56146.4 |
| duf4876 domain-containing protein | A5CPYCFAH4_13830 | Not Available | Positive | 1610529 - 1611740 | 44112.4 |
| abc transporter atp-binding protein | A5CPYCFAH4_13840 | P54591 | Positive | 1611763 - 1612650 | 33361.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
