Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | A5CPYCFAH4_12750 | Q2EHL8 | Positive | 1484785 - 1487142 | 87337.5 |
| abc transporter permease | A5CPYCFAH4_12760 | Q7NUJ3 | Positive | 1487149 - 1489584 | 90695.3 |
| abc transporter atp-binding protein | A5CPYCFAH4_12770 | Q58903 | Positive | 1489620 - 1490306 | 25668.0 |
| hypothetical protein | A5CPYCFAH4_12780 | Not Available | Negative | 1490332 - 1490580 | 9384.34 |
| porin | A5CPYCFAH4_12790 | Not Available | Positive | 1490704 - 1491753 | 39054.7 |
| hypothetical protein | A5CPYCFAH4_12800 | Q72DI6 | Positive | 1491772 - 1493058 | 46249.2 |
| integrase | A5CPYCFAH4_12810 | Q9KA25 | Positive | 1493518 - 1494729 | 45878.4 |
| transcriptional regulator | A5CPYCFAH4_12820 | Not Available | Positive | 1495199 - 1495744 | 20888.4 |
| hypothetical protein | A5CPYCFAH4_12830 | Not Available | Positive | 1495800 - 1496705 | 33478.3 |
| hypothetical protein | A5CPYCFAH4_12840 | O34753 | Positive | 1496787 - 1497959 | 42374.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
