Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-galactosidase | A5CPYCFAH4_12650 | T2KPJ7 | Negative | 1471639 - 1473447 | 68632.3 |
| tyrosine recombinase xerc | A5CPYCFAH4_12660 | Q71Y59 | Negative | 1473632 - 1474528 | 34596.7 |
| ribosomal protein l11 methyltransferase | A5CPYCFAH4_12670 | P60093 | Positive | 1474599 - 1475426 | 29534.3 |
| dna repair protein reco | A5CPYCFAH4_12680 | Q8A275 | Positive | 1475427 - 1476155 | 27912.7 |
| hypothetical protein | A5CPYCFAH4_12690 | Not Available | Positive | 1476204 - 1476614 | 15182.4 |
| sensor histidine kinase | A5CPYCFAH4_12700 | P10955 | Negative | 1476738 - 1478042 | 48356.7 |
| sigma-54-dependent fis family transcriptional regulator | A5CPYCFAH4_12710 | Q9APD9 | Negative | 1478039 - 1479403 | 50948.8 |
| transporter | A5CPYCFAH4_12720 | Not Available | Positive | 1479604 - 1481082 | 54196.0 |
| abc transporter permease | A5CPYCFAH4_12730 | Q57500 | Positive | 1481101 - 1482363 | 47934.3 |
| abc transporter permease | A5CPYCFAH4_12740 | Q6MPX9 | Positive | 1482406 - 1484772 | 88457.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
