Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5CPYCFAH4_01190 | Not Available | Positive | 132271 - 132507 | 8414.59 |
| hypothetical protein | A5CPYCFAH4_01200 | Not Available | Positive | 132712 - 133122 | 16117.2 |
| phosphoadenosine phosphosulfate sulfurtransferase | A5CPYCFAH4_01210 | P77216 | Positive | 133119 - 134435 | 51801.1 |
| chromosome partitioning protein parb | A5CPYCFAH4_01220 | P77174 | Positive | 134446 - 134952 | 19517.6 |
| upf0056 inner membrane protein | A5CPYCFAH4_01230 | Q9UZ49 | Positive | 135306 - 136019 | 25612.3 |
| metal ion (mn2+/fe2+) transporter (nramp) family metal ion transporter | A5CPYCFAH4_01240 | Q0BW85 | Positive | 136173 - 137387 | 44141.0 |
| hypothetical protein | A5CPYCFAH4_01250 | Not Available | Positive | 137658 - 142376 | 169734.0 |
| membrane protein | A5CPYCFAH4_01260 | Q729H8 | Positive | 142357 - 144669 | 86600.1 |
| antibiotic biosynthesis monooxygenase | A5CPYCFAH4_01270 | P94425 | Negative | 144787 - 145062 | 10376.4 |
| putative thiol peroxidase | A5CPYCFAH4_01280 | Q8ZE42 | Negative | 145080 - 145586 | 17725.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
