Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoylalanine--d-glutamate ligase | A5CPYCFAH4_12250 | Q5LIJ5 | Negative | 1432170 - 1433519 | 48875.5 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | A5CPYCFAH4_12260 | A0M530 | Negative | 1433522 - 1434766 | 45926.3 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | A5CPYCFAH4_12270 | Q8A254 | Negative | 1434783 - 1436240 | 52702.1 |
| penicillin-binding protein | A5CPYCFAH4_12280 | P0A0U8 | Negative | 1436242 - 1438509 | 84945.7 |
| hypothetical protein | A5CPYCFAH4_12290 | Not Available | Negative | 1438516 - 1439031 | 20365.1 |
| ribosomal rna small subunit methyltransferase h | A5CPYCFAH4_12300 | A6LEV0 | Negative | 1439039 - 1439941 | 33342.0 |
| glycerol acyltransferase | A5CPYCFAH4_12310 | Not Available | Positive | 1440035 - 1440868 | 32351.5 |
| hemolysin a | A5CPYCFAH4_12320 | Not Available | Positive | 1440906 - 1441898 | 38756.4 |
| hypothetical protein | A5CPYCFAH4_12330 | Not Available | Positive | 1442032 - 1442826 | 28718.7 |
| hypothetical protein | A5CPYCFAH4_12340 | Not Available | Positive | 1442959 - 1443528 | 21363.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
