Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-amino-3-ketobutyrate coenzyme a ligase | A5CPYCFAH4_12150 | P0AB78 | Negative | 1423344 - 1424531 | 43347.3 |
| udp-glucose 4-epimerase | A5CPYCFAH4_12160 | P55180 | Positive | 1424871 - 1425899 | 37927.1 |
| hypothetical protein | A5CPYCFAH4_12170 | Not Available | Negative | 1425984 - 1427642 | 58618.0 |
| hypothetical protein | A5CPYCFAH4_12180 | Not Available | Negative | 1427656 - 1427982 | 11934.3 |
| rna polymerase sigma factor | A5CPYCFAH4_12190 | Q45585 | Negative | 1427979 - 1428539 | 21603.0 |
| 50s ribosomal protein l25 | A5CPYCFAH4_12200 | Q89YZ1 | Positive | 1428747 - 1429316 | 20443.9 |
| peptidyl-trna hydrolase | A5CPYCFAH4_12210 | A6L6X1 | Positive | 1429327 - 1429890 | 20727.1 |
| hypothetical protein | A5CPYCFAH4_12220 | Not Available | Negative | 1430125 - 1430340 | 7195.78 |
| heat-shock protein hsp15 | A5CPYCFAH4_12230 | P0ACH0 | Negative | 1430347 - 1430742 | 15026.0 |
| rod shape-determining protein roda | A5CPYCFAH4_12240 | Q6LMF5 | Negative | 1430750 - 1432165 | 52347.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
