Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| patatin | A5CPYCFAH4_12050 | O34731 | Positive | 1409753 - 1412080 | 86933.0 |
| phosphoglycerate kinase | A5CPYCFAH4_12060 | Q8A753 | Positive | 1412213 - 1413475 | 45196.7 |
| peptidase m13 | A5CPYCFAH4_12070 | P42893 | Positive | 1413603 - 1415594 | 73970.9 |
| abc transporter atp-binding protein | A5CPYCFAH4_12080 | C0SPB4 | Positive | 1415771 - 1416691 | 34409.6 |
| hypothetical protein | A5CPYCFAH4_12090 | Not Available | Positive | 1416698 - 1416868 | 6024.55 |
| abc transporter permease | A5CPYCFAH4_12100 | O07523 | Positive | 1416873 - 1418192 | 48729.7 |
| hybrid sensor histidine kinase/response regulator | A5CPYCFAH4_12110 | Q9HUI3 | Positive | 1418329 - 1420818 | 90251.9 |
| sigma-54-dependent fis family transcriptional regulator | A5CPYCFAH4_12120 | P25852 | Positive | 1420821 - 1422173 | 49018.9 |
| hypothetical protein | A5CPYCFAH4_12130 | Not Available | Positive | 1422424 - 1422678 | 8306.99 |
| transcriptional regulator | A5CPYCFAH4_12140 | P44337 | Negative | 1422859 - 1423332 | 17732.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
