Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase sigma-70 factor | A5CPYCFAH4_11060 | D0ZSY9 | Negative | 1274433 - 1275029 | 23245.1 |
| mfs transporter | A5CPYCFAH4_11070 | P54585 | Positive | 1275975 - 1277450 | 52623.2 |
| anaerobic sulfatase-maturating enzyme | A5CPYCFAH4_11080 | Q02550 | Negative | 1277617 - 1278879 | 47895.5 |
| aldose 1-epimerase | A5CPYCFAH4_11090 | P05149 | Positive | 1279054 - 1280178 | 41197.5 |
| histidine ammonia-lyase | A5CPYCFAH4_11100 | B8ZV93 | Positive | 1280366 - 1281889 | 55638.9 |
| 3-ketoacyl-acp reductase | A5CPYCFAH4_11110 | Q5HPW0 | Positive | 1281988 - 1282728 | 25982.3 |
| beta-ketoacyl synthase | A5CPYCFAH4_11120 | P0A954 | Positive | 1282733 - 1283956 | 43558.9 |
| hypothetical protein | A5CPYCFAH4_11130 | Q8DHS3 | Positive | 1283971 - 1284219 | 9320.08 |
| lipid a biosynthesis acyltransferase | A5CPYCFAH4_11140 | Not Available | Positive | 1284209 - 1285090 | 33599.6 |
| b12-binding domain-containing radical sam protein | A5CPYCFAH4_11150 | C0JRZ9 | Positive | 1285087 - 1286445 | 51308.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
