Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5CPYCFAH4_10660 | T2KNA8 | Negative | 1213442 - 1216684 | 118799.0 |
| alpha-rhamnosidase | A5CPYCFAH4_10670 | Q82PP4 | Negative | 1216789 - 1219422 | 97743.8 |
| rhamnulose-1-phosphate aldolase | A5CPYCFAH4_10680 | Q8A1A0 | Negative | 1219610 - 1220413 | 29671.9 |
| sugar:proton symporter | A5CPYCFAH4_10690 | A7FN78 | Negative | 1220416 - 1221429 | 35604.9 |
| lactaldehyde reductase | A5CPYCFAH4_10700 | P0A9S2 | Negative | 1221440 - 1222594 | 40982.3 |
| l-rhamnose isomerase | A5CPYCFAH4_10710 | Q8A1A2 | Negative | 1222599 - 1223852 | 47175.0 |
| rhamnulokinase | A5CPYCFAH4_10720 | Q8A1A3 | Negative | 1223866 - 1225287 | 51307.0 |
| transcriptional regulator | A5CPYCFAH4_10730 | Q00753 | Positive | 1225380 - 1226282 | 34310.0 |
| susc/raga family tonb-linked outer membrane protein | A5CPYCFAH4_10740 | T2KPJ3 | Positive | 1227066 - 1230020 | 108925.0 |
| membrane protein | A5CPYCFAH4_10750 | T2KNB8 | Positive | 1230030 - 1231541 | 57757.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
