Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | 3BBH6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
737674 bp
Thymine Count
735375 bp
Guanine Count
1014129 bp
Cytosine Count
1020314 bp
Genome Length
3507492 bp
Protein-coding Genes
2923 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A3BBH6_26830 | Q91XD4 | Positive | 3202818 - 3204515 | 60510.5 |
| urocanate hydratase | A3BBH6_26840 | Q86AX3 | Positive | 3204521 - 3206542 | 75138.3 |
| histidine ammonia-lyase | A3BBH6_26850 | Q67JH4 | Positive | 3206559 - 3208040 | 54454.5 |
| imidazolonepropionase | A3BBH6_26860 | A0LZE0 | Positive | 3208037 - 3209278 | 44406.8 |
| peptide methionine sulfoxide reductase msra | A3BBH6_26870 | O83641 | Positive | 3209298 - 3210398 | 39803.4 |
| acetyltransferase | A3BBH6_26880 | P50870 | Negative | 3210735 - 3211361 | 23503.0 |
| sos mutagenesis and repair protein umuc | A3BBH6_26890 | P22494 | Negative | 3211373 - 3212635 | 47870.8 |
| sos-response transcriptional regulator umud-like protein | A3BBH6_26900 | P22493 | Negative | 3212741 - 3213193 | 16450.7 |
| membrane protein | A3BBH6_26910 | O31859 | Positive | 3213270 - 3214154 | 30795.5 |
| hypothetical protein | A3BBH6_26920 | Not Available | Negative | 3214123 - 3214308 | 7010.83 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
