Alistipes onderdonkii subsp. vulgaris 3BBH6

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes onderdonkii subsp. vulgaris 3BBH6 is a Gram-negative, anaerobic bacterium characterized by the presence of flagella, which facilitates motility in anaerobic environments. It possesses a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability in specific ecological niches. The strain is classified under the genus Alistipes, which is known for its role in the human gut microbiome, where it can play a part in various metabolic processes. The anaerobic nature of Alistipes onderdonkii subsp. vulgaris 3BBH6 suggests that it thrives in low-oxygen environments, such as the intestinal tract, where it may engage in fermentation and other anaerobic metabolic pathways. The accession number for this strain is AP019734.1, which provides a reference for genomic and phylogenetic studies. This genetic data can offer insights into the strain’s metabolism and potential interactions within microbial communities. Understanding the characteristics of Alistipes onderdonkii subsp. vulgaris 3BBH6 not only enhances knowledge of its biological functions but also underscores its ecological significance in the gut microbiome. Its ability to thrive as an anaerobe with motility suggests a potential role in the digestion of complex carbohydrates and the maintenance of gut health, highlighting the intricate relationships between gut bacteria and their host.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes onderdonkii
Strain3BBH6

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes onderdonkii subsp. vulgaris 3BBH6, Complete Genome

Gene Summary

Adenine Count

737674 bp

Thymine Count

735375 bp

Guanine Count

1014129 bp

Cytosine Count

1020314 bp

Genome Length

3507492 bp

Protein-coding Genes

2923 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methylated-dna--protein-cysteine methyltransferaseA3BBH6_15530P44687Negative1830382 - 183090318934.7
fosmidomycin resistance proteinA3BBH6_15540P52067Negative1831014 - 183224643828.9
gntr family transcriptional regulatorA3BBH6_15550O07007Negative1832256 - 183293024739.9
hypothetical proteinA3BBH6_15560Not AvailableNegative1833230 - 18334277508.8
hypothetical proteinA3BBH6_15570P11765Positive1833489 - 183401620831.1
lruc domain-containing proteinA3BBH6_15580Not AvailablePositive1834332 - 183632973032.3
sigma-54-dependent fis family transcriptional regulatorA3BBH6_15590Q06065Positive1836450 - 183779049270.5
potassium-transporting atpase potassium-binding subunitA3BBH6_15600Q8A519Positive1838294 - 183998561537.8
potassium-transporting atpase atp-binding subunitA3BBH6_15610Q9RZP0Positive1840022 - 184204071910.0
potassium-transporting atpase kdpc subunitA3BBH6_15620Q64YU7Positive1842053 - 184268521892.2

Displaying genes 1581 – 1590 of 2977 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.