Alistipes ihumii AP11

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes ihumii AP11 is a Gram-negative bacterium predominantly found in the gut. This species possesses flagella, indicating that it is motile, which may contribute to its ecological niche within the gastrointestinal tract. The genome of Alistipes ihumii AP11 comprises a single replicon, suggesting a streamlined genetic organization that can be advantageous for survival and adaptation in its specific habitat. The reference accession number for Alistipes ihumii AP11 is CP102294.1, which provides a genetic basis for further studies and comparisons within the genus Alistipes. The presence of this bacterium in the gut microbiome may play a role in various biological processes, including digestion, metabolism, and the maintenance of gut health. The motility conferred by flagella may facilitate the colonization of specific niches within the gut, allowing Alistipes ihumii AP11 to compete effectively with other microbial inhabitants. Additionally, the characteristics of Gram-negative bacteria, including the structure of their cell walls, suggest potential interactions with the host immune system, influencing health outcomes. Overall, the traits of Alistipes ihumii AP11 underscore its potential significance in gut ecology and its role in the complex interplay between the microbiome and host health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes ihumii
StrainAP11

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes ihumii AP11, Complete Genome

Gene Summary

Adenine Count

588608 bp

Thymine Count

582180 bp

Guanine Count

802418 bp

Cytosine Count

806809 bp

Genome Length

2780015 bp

Protein-coding Genes

2174 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf3575 domain-containing proteinNQ491_01395Not AvailableNegative346585 - 34723224728.8
duf6125 family proteinNQ491_01400Not AvailableNegative347311 - 34788021543.8
endonuclease/exonuclease/phosphatase family proteinNQ491_01405Q9GUC9Negative348100 - 34974360214.2
dicarboxylate/amino acid:cation symporterNQ491_01410P24943Positive350117 - 35142146594.5
l,d-transpeptidase family proteinNQ491_01415Not AvailablePositive351418 - 35295357423.3
duf3332 domain-containing proteinNQ491_01420Not AvailablePositive354134 - 35468821095.6
hypothetical proteinNQ491_01425Not AvailableNegative355274 - 3553964744.95
Trna-pheNot AvailableNot AvailablePositive356080 - 356152Not Available
nad+ synthaseNQ491_01435P74292Positive356276 - 35784758118.8
soxr reducing system rsec family proteinNQ491_01440Not AvailablePositive357876 - 35829515114.7

Displaying genes 321 – 330 of 2252 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.