Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3575 domain-containing protein | NQ491_01395 | Not Available | Negative | 346585 - 347232 | 24728.8 |
| duf6125 family protein | NQ491_01400 | Not Available | Negative | 347311 - 347880 | 21543.8 |
| endonuclease/exonuclease/phosphatase family protein | NQ491_01405 | Q9GUC9 | Negative | 348100 - 349743 | 60214.2 |
| dicarboxylate/amino acid:cation symporter | NQ491_01410 | P24943 | Positive | 350117 - 351421 | 46594.5 |
| l,d-transpeptidase family protein | NQ491_01415 | Not Available | Positive | 351418 - 352953 | 57423.3 |
| duf3332 domain-containing protein | NQ491_01420 | Not Available | Positive | 354134 - 354688 | 21095.6 |
| hypothetical protein | NQ491_01425 | Not Available | Negative | 355274 - 355396 | 4744.95 |
| Trna-phe | Not Available | Not Available | Positive | 356080 - 356152 | Not Available |
| nad+ synthase | NQ491_01435 | P74292 | Positive | 356276 - 357847 | 58118.8 |
| soxr reducing system rsec family protein | NQ491_01440 | Not Available | Positive | 357876 - 358295 | 15114.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
