Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ491_01245 | Not Available | Negative | 298951 - 299265 | 12195.1 |
| nad-dependent dna ligase liga | NQ491_01250 | A6LA55 | Positive | 299468 - 301579 | 78823.6 |
| 4-hydroxy-tetrahydrodipicolinate synthase | NQ491_01255 | A6LA57 | Positive | 301618 - 302505 | 31140.5 |
| duf4919 domain-containing protein | NQ491_01260 | Not Available | Positive | 302591 - 303346 | 28535.2 |
| lema family protein | NQ491_01265 | A8AVK0 | Positive | 303379 - 303966 | 21967.1 |
| tpm domain-containing protein | NQ491_01270 | P55140 | Positive | 303976 - 304755 | 27369.8 |
| clostripain-related cysteine peptidase | NQ491_01275 | P09870 | Positive | 304877 - 306064 | 43897.8 |
| efflux transporter outer membrane subunit | NQ491_01280 | Q8CWA4 | Negative | 306073 - 307473 | 51418.0 |
| tyrosine-type recombinase/integrase | NQ491_01285 | Q8FWV9 | Negative | 307483 - 310605 | 113598.0 |
| efflux rnd transporter periplasmic adaptor subunit | NQ491_01290 | Q8FWV8 | Negative | 310611 - 311681 | 39235.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
