Alistipes ihumii AP11

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes ihumii AP11 is a Gram-negative bacterium predominantly found in the gut. This species possesses flagella, indicating that it is motile, which may contribute to its ecological niche within the gastrointestinal tract. The genome of Alistipes ihumii AP11 comprises a single replicon, suggesting a streamlined genetic organization that can be advantageous for survival and adaptation in its specific habitat. The reference accession number for Alistipes ihumii AP11 is CP102294.1, which provides a genetic basis for further studies and comparisons within the genus Alistipes. The presence of this bacterium in the gut microbiome may play a role in various biological processes, including digestion, metabolism, and the maintenance of gut health. The motility conferred by flagella may facilitate the colonization of specific niches within the gut, allowing Alistipes ihumii AP11 to compete effectively with other microbial inhabitants. Additionally, the characteristics of Gram-negative bacteria, including the structure of their cell walls, suggest potential interactions with the host immune system, influencing health outcomes. Overall, the traits of Alistipes ihumii AP11 underscore its potential significance in gut ecology and its role in the complex interplay between the microbiome and host health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes ihumii
StrainAP11

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes ihumii AP11, Complete Genome

Gene Summary

Adenine Count

588608 bp

Thymine Count

582180 bp

Guanine Count

802418 bp

Cytosine Count

806809 bp

Genome Length

2780015 bp

Protein-coding Genes

2174 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mlic family proteinNQ491_11200Not AvailableNegative2765172 - 276588225869.3
yccf domain-containing proteinNQ491_11205P0AB12Negative2765911 - 276629413665.5
nucleotide exchange factor grpeNQ491_11210Q5LED3Positive2766877 - 276749723004.9
molecular chaperone dnajNQ491_11215Q64VI7Positive2767505 - 276867741774.6
dna mismatch repair endonuclease mutlNQ491_11220A6LEJ8Positive2768729 - 277064870904.0
rhomboid family intramembrane serine proteaseNQ491_11225P96617Positive2770658 - 277133525015.3
endonuclease/exonuclease/phosphatase family proteinNQ491_11230Not AvailablePositive2771443 - 277257643109.8
yhch/yjgk/yial family proteinNQ491_11235P37673Positive2772628 - 277307416510.9
m48 family metallopeptidaseNQ491_11240Not AvailableNegative2773434 - 277414427358.2
argininosuccinate lyaseNQ491_11245Q8A1D3Negative2774161 - 277549250085.4

Displaying genes 2241 – 2250 of 2252 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.