Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | NQ491_10900 | B7VMD2 | Positive | 2704464 - 2705684 | 46039.2 |
| helix-turn-helix domain-containing protein | NQ491_10905 | Not Available | Positive | 2705992 - 2706357 | 13561.3 |
| prict-2 domain-containing protein | NQ491_10910 | Not Available | Positive | 2706689 - 2707231 | 21386.2 |
| tyrosine-type recombinase/integrase | NQ491_10915 | Not Available | Negative | 2707376 - 2707950 | 21606.7 |
| yggl family protein | NQ491_10920 | Not Available | Negative | 2707967 - 2708293 | 12945.2 |
| fic family protein | NQ491_10925 | Q7DDR9 | Negative | 2708356 - 2708907 | 21053.4 |
| higa family addiction module antitoxin | NQ491_10930 | Q7A224 | Negative | 2708913 - 2709248 | 12122.6 |
| duf2442 domain-containing protein | NQ491_10935 | Not Available | Negative | 2709490 - 2709723 | 8836.42 |
| duf4160 domain-containing protein | NQ491_10940 | Not Available | Negative | 2709731 - 2709988 | 10015.3 |
| helix-turn-helix domain-containing protein | NQ491_10945 | Not Available | Positive | 2710755 - 2710913 | 6146.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
