Alistipes ihumii AP11

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes ihumii AP11 is a Gram-negative bacterium predominantly found in the gut. This species possesses flagella, indicating that it is motile, which may contribute to its ecological niche within the gastrointestinal tract. The genome of Alistipes ihumii AP11 comprises a single replicon, suggesting a streamlined genetic organization that can be advantageous for survival and adaptation in its specific habitat. The reference accession number for Alistipes ihumii AP11 is CP102294.1, which provides a genetic basis for further studies and comparisons within the genus Alistipes. The presence of this bacterium in the gut microbiome may play a role in various biological processes, including digestion, metabolism, and the maintenance of gut health. The motility conferred by flagella may facilitate the colonization of specific niches within the gut, allowing Alistipes ihumii AP11 to compete effectively with other microbial inhabitants. Additionally, the characteristics of Gram-negative bacteria, including the structure of their cell walls, suggest potential interactions with the host immune system, influencing health outcomes. Overall, the traits of Alistipes ihumii AP11 underscore its potential significance in gut ecology and its role in the complex interplay between the microbiome and host health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes ihumii
StrainAP11

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes ihumii AP11, Complete Genome

Gene Summary

Adenine Count

588608 bp

Thymine Count

582180 bp

Guanine Count

802418 bp

Cytosine Count

806809 bp

Genome Length

2780015 bp

Protein-coding Genes

2174 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s3NQ491_05950A6LEI5Negative1458521 - 145926127183.2
50s ribosomal protein l22NQ491_05955A0M593Negative1459267 - 145968015659.6
30s ribosomal protein s19NQ491_05960Q5L8B3Negative1459689 - 14599589898.04
50s ribosomal protein l2NQ491_05965Q5L8B2Negative1459977 - 146080129773.2
50s ribosomal protein l23NQ491_05970B3QY26Negative1460807 - 146109710942.5
50s ribosomal protein l4NQ491_05975A6LEJ0Negative1461185 - 146181422945.9
50s ribosomal protein l3NQ491_05980Q5L8A9Negative1461817 - 146243422126.7
30s ribosomal protein s10NQ491_05985Q5L8A8Negative1462615 - 146292011349.1
elongation factor gNQ491_05990A6KYJ7Negative1462936 - 146504177154.4
30s ribosomal protein s7NQ491_05995B2RLZ5Negative1465065 - 146554118093.3

Displaying genes 1191 – 1200 of 2252 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.