Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrofolate reductase | NQ519_03370 | P11045 | Negative | 858025 - 858504 | 18180.7 |
| thymidylate synthase | NQ519_03375 | A7HVX4 | Negative | 858510 - 859403 | 33954.8 |
| udp-2,3-diacylglucosamine diphosphatase | NQ519_03380 | B0UVZ2 | Negative | 859400 - 860161 | 28850.4 |
| ahpc/tsa family protein | NQ519_03385 | Q63DQ8 | Negative | 860161 - 861303 | 42216.2 |
| duf4290 domain-containing protein | NQ519_03390 | Not Available | Negative | 861508 - 862206 | 27553.7 |
| sigma-54 dependent transcriptional regulator | NQ519_03395 | P25852 | Positive | 862462 - 863601 | 41691.1 |
| had-ia family hydrolase | NQ519_03400 | Q98ML8 | Negative | 863829 - 864479 | 23587.5 |
| sodium:proton antiporter | NQ519_03405 | P27611 | Negative | 864476 - 865915 | 50881.6 |
| duf4492 domain-containing protein | NQ519_03410 | Not Available | Positive | 866323 - 866553 | 8501.63 |
| cytochrome ubiquinol oxidase subunit i | NQ519_03415 | P0ABK0 | Positive | 866563 - 868122 | 58007.7 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
