Alistipes senegalensis JC50

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes senegalensis JC50 is a Gram-negative bacterium characterized by the presence of flagella, which may contribute to its motility and ecological adaptability. This species is notable for having two replicons, indicating a complex genomic structure that may facilitate various cellular processes. The primary host identified for Alistipes senegalensis JC50 is Bos, commonly known as cattle. This association suggests that A. senegalensis may play a role in the microbiota of ruminants, potentially influencing their digestion and overall health. The genomic information for this bacterium is available through two specific accessions: CP102252.1 and CP085931.1. These accession numbers provide a resource for researchers interested in studying the genetic characteristics and potential applications of A. senegalensis, such as its metabolic capabilities or interactions within the bovine gut. Given its classification and known traits, Alistipes senegalensis JC50 may contribute to the complex microbial ecosystem in the gastrointestinal tract of its host. Understanding this relationship could provide insights into the role of such bacteria in digestion, nutrient absorption, and overall host health. Further research into its functions and interactions within the bovine microbiome could shed light on potential benefits or implications for cattle management and health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes senegalensis
StrainJC50

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Bos
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes senegalensis JC50, Complete Genome

Gene Summary

Adenine Count

843355 bp

Thymine Count

833767 bp

Guanine Count

1170539 bp

Cytosine Count

1175536 bp

Genome Length

4023197 bp

Protein-coding Genes

3164 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinLK406_15220Not AvailablePositive3785110 - 378763588057.5
fe-s cluster assembly protein sufbLK406_15225Q55790Positive3787850 - 378929553415.4
flavodoxin family proteinLK406_15230Q58483Positive3789304 - 378987620827.0
fe-s cluster assembly atpase sufcLK406_15235P77499Positive3789870 - 379062227674.6
sufd family fe-s cluster assembly proteinLK406_15240Q55792Positive3790622 - 379144329015.5
sufs family cysteine desulfuraseLK406_15245A8AH80Positive3791446 - 379266644246.9
thymidylate kinaseLK406_15250P9WKE0Positive3792807 - 379349325330.3
doxx family membrane proteinLK406_15255Q45FN5Positive3793490 - 379459642157.7
efflux rnd transporter periplasmic adaptor subunitLK406_15260A4WCC0Positive3794733 - 379576137122.2
efflux rnd transporter permease subunitLK406_15265D0ZEW1Positive3795769 - 3798801111218.0

Displaying genes 6281 – 6290 of 6471 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.