Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | LK406_13120 | P0AFQ4 | Negative | 3254969 - 3256060 | 39318.4 |
| abc transporter atp-binding protein | LK406_13125 | P0A9U1 | Negative | 3256062 - 3256805 | 27621.4 |
| abc transporter atp-binding protein | LK406_13130 | P0A9U1 | Negative | 3256795 - 3257718 | 33453.3 |
| hlyd family efflux transporter periplasmic adaptor subunit | LK406_13135 | Q9L9D4 | Negative | 3257733 - 3258626 | 32536.7 |
| tolc family protein | LK406_13140 | Not Available | Negative | 3258640 - 3259920 | 48235.5 |
| tetr/acrr family transcriptional regulator | LK406_13145 | P96701 | Negative | 3259924 - 3260568 | 24774.0 |
| glycosyltransferase family 39 protein | LK406_13150 | Not Available | Positive | 3260726 - 3262441 | 65117.5 |
| gtra family protein | LK406_13155 | P64293 | Positive | 3262438 - 3262806 | 14180.4 |
| acyltransferase family protein | LK406_13160 | O31660 | Positive | 3262810 - 3263844 | 39204.5 |
| duf2029 domain-containing protein | LK406_13165 | Not Available | Negative | 3263765 - 3265009 | 48049.8 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
