Alistipes senegalensis JC50

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes senegalensis JC50 is a Gram-negative bacterium characterized by the presence of flagella, which may contribute to its motility and ecological adaptability. This species is notable for having two replicons, indicating a complex genomic structure that may facilitate various cellular processes. The primary host identified for Alistipes senegalensis JC50 is Bos, commonly known as cattle. This association suggests that A. senegalensis may play a role in the microbiota of ruminants, potentially influencing their digestion and overall health. The genomic information for this bacterium is available through two specific accessions: CP102252.1 and CP085931.1. These accession numbers provide a resource for researchers interested in studying the genetic characteristics and potential applications of A. senegalensis, such as its metabolic capabilities or interactions within the bovine gut. Given its classification and known traits, Alistipes senegalensis JC50 may contribute to the complex microbial ecosystem in the gastrointestinal tract of its host. Understanding this relationship could provide insights into the role of such bacteria in digestion, nutrient absorption, and overall host health. Further research into its functions and interactions within the bovine microbiome could shed light on potential benefits or implications for cattle management and health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes senegalensis
StrainJC50

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Bos
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes senegalensis JC50, Complete Genome

Gene Summary

Adenine Count

843355 bp

Thymine Count

833767 bp

Guanine Count

1170539 bp

Cytosine Count

1175536 bp

Genome Length

4023197 bp

Protein-coding Genes

3164 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
luxr c-terminal-related transcriptional regulatorLK406_12270Q46791Positive3025078 - 302582728880.3
l-serine ammonia-lyase, iron-sulfur-dependent, subunit alphaLK406_12275O86564Negative3025902 - 302710743202.4
Trna-argNot AvailableNot AvailablePositive3027181 - 3027255Not Available
outer membrane protein transport proteinLK406_12285Q9K1M2Negative3027318 - 302879953482.5
pyridoxal phosphate-dependent aminotransferaseLK406_12290O58489Negative3029016 - 303021244921.2
hu family dna-binding proteinLK406_12295Q87E48Negative3030237 - 30304979593.82
Trna-serNot AvailableNot AvailablePositive3030669 - 3030756Not Available
recombinase family proteinLK406_12305P07945Negative3031616 - 303231126973.9
duf3575 domain-containing proteinLK406_12310Not AvailablePositive3032938 - 303426651233.4
duf5119 domain-containing proteinLK406_12315A7LXW1Positive3034295 - 303518231855.6

Displaying genes 5691 – 5700 of 6471 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.