Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | LK406_10545 | T2KPJ3 | Negative | 2582988 - 2586164 | 119569.0 |
| glycoside hydrolase family 88 protein | LK406_10550 | O34559 | Negative | 2586322 - 2587629 | 49467.7 |
| glycoside hydrolase family 88 protein | LK406_10555 | O34559 | Negative | 2587643 - 2588842 | 46386.8 |
| family 43 glycosylhydrolase | LK406_10560 | Q82P90 | Negative | 2588891 - 2590291 | 51641.7 |
| fad-dependent oxidoreductase | LK406_10565 | Not Available | Negative | 2590305 - 2592167 | 68970.4 |
| glycoside hydrolase family 2 | LK406_10570 | Q75W54 | Negative | 2592164 - 2594890 | 103851.0 |
| hypothetical protein | LK406_10575 | Not Available | Negative | 2594902 - 2596914 | 75818.4 |
| response regulator | LK406_10580 | T2KMF4 | Positive | 2597201 - 2601178 | 150594.0 |
| helix-turn-helix domain-containing protein | LK406_10585 | Not Available | Positive | 2601967 - 2602272 | 11349.0 |
| hipa domain-containing protein | LK406_10590 | Q8EIX3 | Positive | 2602276 - 2603535 | 47994.4 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
