Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s13 | LK406_10345 | Q5L8D3 | Positive | 2530132 - 2530512 | 14079.4 |
| 30s ribosomal protein s11 | LK406_10350 | B2RLW7 | Positive | 2530526 - 2530915 | 13786.8 |
| 30s ribosomal protein s4 | LK406_10355 | A6LEG6 | Positive | 2530967 - 2531575 | 22786.5 |
| dna-directed rna polymerase subunit alpha | LK406_10360 | A6KYH0 | Positive | 2531597 - 2532589 | 36994.8 |
| 50s ribosomal protein l17 | LK406_10365 | B2RLW4 | Positive | 2532594 - 2533205 | 22021.9 |
| susc/raga family tonb-linked outer membrane protein | LK406_10370 | T2KM18 | Positive | 2533552 - 2536563 | 112344.0 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_10375 | T2KNB8 | Positive | 2536582 - 2538039 | 54590.6 |
| duf4843 domain-containing protein | LK406_10380 | Not Available | Positive | 2538048 - 2538854 | 29809.9 |
| hypothetical protein | LK406_10385 | Not Available | Positive | 2538868 - 2540397 | 57192.8 |
| zinc-dependent metalloprotease | LK406_10390 | Not Available | Positive | 2540419 - 2543019 | 97976.6 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
