Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s8 | LK406_10295 | A5FN07 | Positive | 2524871 - 2525269 | 14694.0 |
| 50s ribosomal protein l6 | LK406_10300 | Q11QC7 | Positive | 2525295 - 2525882 | 21058.8 |
| 50s ribosomal protein l18 | LK406_10305 | A4VYQ8 | Positive | 2525899 - 2526261 | 13124.0 |
| 30s ribosomal protein s5 | LK406_10310 | Q8A493 | Positive | 2526268 - 2526786 | 18121.2 |
| 50s ribosomal protein l30 | LK406_10315 | Q8A494 | Positive | 2526798 - 2527052 | 9172.26 |
| 50s ribosomal protein l15 | LK406_10320 | Q8A495 | Positive | 2527081 - 2527527 | 15501.7 |
| preprotein translocase subunit secy | LK406_10325 | P38375 | Positive | 2527550 - 2528926 | 50326.6 |
| type i methionyl aminopeptidase | LK406_10330 | P69000 | Positive | 2528958 - 2529734 | 28125.7 |
| translation initiation factor if-1 | LK406_10335 | Q7MTN5 | Positive | 2529741 - 2529959 | 8207.17 |
| type b 50s ribosomal protein l36 | LK406_10340 | A6GZ77 | Positive | 2529978 - 2530094 | 4496.87 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
