Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LK406_10195 | Not Available | Negative | 2512156 - 2513208 | 36604.3 |
| hypothetical protein | LK406_10200 | Not Available | Negative | 2513343 - 2514005 | 24354.2 |
| 30s ribosomal protein s12 | LK406_10205 | A6LEJ5 | Positive | 2514383 - 2514763 | 13911.0 |
| 30s ribosomal protein s7 | LK406_10210 | B2RLZ5 | Positive | 2514802 - 2515278 | 18075.3 |
| elongation factor g | LK406_10215 | A6KYJ7 | Positive | 2515295 - 2517409 | 77592.8 |
| 30s ribosomal protein s10 | LK406_10220 | Q5L8A8 | Positive | 2517419 - 2517724 | 11399.1 |
| 50s ribosomal protein l3 | LK406_10225 | A6KYJ5 | Positive | 2517845 - 2518459 | 21827.6 |
| 50s ribosomal protein l4 | LK406_10230 | A6LEJ0 | Positive | 2518461 - 2519087 | 22516.4 |
| 50s ribosomal protein l23 | LK406_10235 | B3QY26 | Positive | 2519102 - 2519392 | 10972.5 |
| 50s ribosomal protein l2 | LK406_10240 | A6LEI8 | Positive | 2519398 - 2520222 | 29585.1 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
