Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-tyrosyl-trna(tyr) deacylase | LK406_09895 | Q8A2P0 | Positive | 2443644 - 2444096 | 16344.7 |
| dna/rna non-specific endonuclease | LK406_09900 | P38446 | Positive | 2444108 - 2445328 | 44812.7 |
| tigr01212 family radical sam protein | LK406_09905 | O35008 | Positive | 2445325 - 2446290 | 37045.7 |
| yitt family protein | LK406_09910 | O34792 | Positive | 2446303 - 2447196 | 31589.7 |
| primosomal protein n' | LK406_09915 | P94461 | Positive | 2447196 - 2449454 | 83858.3 |
| comf family protein | LK406_09920 | P46846 | Positive | 2449438 - 2450160 | 26953.6 |
| replicative dna helicase | LK406_09925 | P37469 | Positive | 2450335 - 2451888 | 57000.2 |
| yifb family mg chelatase-like aaa atpase | LK406_09930 | P45049 | Positive | 2452045 - 2453586 | 54524.8 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | LK406_09935 | A6LEU3 | Positive | 2453651 - 2454751 | 39625.4 |
| udp-n-acetylmuramate--l-alanine ligase | LK406_09940 | A6LEU2 | Positive | 2454751 - 2456199 | 53038.0 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
