Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LK406_09845 | Not Available | Negative | 2434999 - 2435628 | 23143.9 |
| trna (guanosine(37)-n1)-methyltransferase trmd | LK406_09850 | B2RMA5 | Negative | 2435632 - 2436309 | 25607.5 |
| fkbm family methyltransferase | LK406_09855 | Q9YDA1 | Negative | 2436343 - 2437074 | 27215.1 |
| mbl fold metallo-hydrolase | LK406_09860 | P75849 | Negative | 2437071 - 2437742 | 24689.1 |
| alpha/beta hydrolase | LK406_09865 | A0A0G3FWY4 | Positive | 2437834 - 2438676 | 30927.1 |
| hypothetical protein | LK406_09870 | Not Available | Positive | 2438687 - 2439835 | 42365.8 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | LK406_09875 | Q8AA22 | Positive | 2439947 - 2441356 | 52823.4 |
| simpl domain-containing protein | LK406_09880 | Not Available | Positive | 2441425 - 2442114 | 25321.4 |
| cytidine deaminase | LK406_09885 | P56389 | Positive | 2442481 - 2442936 | 16795.0 |
| rna pseudouridine synthase | LK406_09890 | P54604 | Positive | 2442945 - 2443631 | 25404.5 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
