Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | LK406_09745 | Not Available | Negative | 2423229 - 2424239 | 36602.7 |
| hypothetical protein | LK406_09750 | Not Available | Negative | 2424246 - 2424671 | 16387.9 |
| hypothetical protein | LK406_09755 | Not Available | Negative | 2424658 - 2425128 | 17951.2 |
| hypothetical protein | LK406_09760 | Not Available | Negative | 2425121 - 2425450 | 12442.0 |
| helix-turn-helix domain-containing protein | LK406_09765 | Not Available | Negative | 2425447 - 2425737 | 11206.6 |
| duf4065 domain-containing protein | LK406_09770 | A0A0H3CCP8 | Negative | 2426602 - 2427042 | 16675.0 |
| higa family addiction module antitoxin | LK406_09775 | Q7A224 | Negative | 2427423 - 2427758 | 12235.9 |
| type ii toxin-antitoxin system rele/pare family toxin | LK406_09780 | Q9KMG5 | Negative | 2427763 - 2428083 | 12843.6 |
| helix-turn-helix domain-containing protein | LK406_09785 | Not Available | Negative | 2428193 - 2428435 | 8590.64 |
| hypothetical protein | LK406_09790 | Not Available | Positive | 2428609 - 2428848 | 9225.06 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
