Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | LK406_09695 | Q8A1G2 | Negative | 2407940 - 2409643 | 64718.6 |
| tonb-dependent receptor | LK406_09700 | Q8A1G1 | Negative | 2409662 - 2412649 | 110661.0 |
| bacon domain-containing protein | LK406_09705 | Not Available | Negative | 2412689 - 2414230 | 55303.5 |
| bacon domain-containing protein | LK406_09710 | Not Available | Negative | 2414259 - 2415227 | 34608.0 |
| site-specific integrase | LK406_09715 | Not Available | Positive | 2415998 - 2417323 | 51815.1 |
| hypothetical protein | LK406_09720 | Not Available | Positive | 2417326 - 2418522 | 47106.1 |
| dna-packaging protein | LK406_09725 | P04893 | Negative | 2418546 - 2419010 | 17055.4 |
| phage tail tape measure protein | LK406_09730 | E7DNB6 | Negative | 2419015 - 2422077 | 112122.0 |
| hypothetical protein | LK406_09735 | Not Available | Negative | 2422109 - 2422570 | 16961.4 |
| hypothetical protein | LK406_09740 | Not Available | Negative | 2422841 - 2423131 | 10570.0 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
