Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 97 protein | LK406_09645 | Q8A6L0 | Negative | 2385971 - 2387992 | 75572.6 |
| glycoside hydrolase family 88 protein | LK406_09650 | O34559 | Negative | 2388005 - 2389372 | 51053.9 |
| right-handed parallel beta-helix repeat-containing protein | LK406_09655 | P0C1A6 | Negative | 2389381 - 2390829 | 52176.4 |
| duf5123 domain-containing protein | LK406_09660 | Not Available | Negative | 2390881 - 2392587 | 62456.3 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_09665 | T2KNB8 | Negative | 2392614 - 2394470 | 70359.2 |
| tonb-dependent receptor | LK406_09670 | T2KPJ3 | Negative | 2394499 - 2397777 | 121752.0 |
| response regulator | LK406_09675 | T2KMF4 | Positive | 2398018 - 2402103 | 152404.0 |
| duf6377 domain-containing protein | LK406_09680 | Not Available | Negative | 2402315 - 2403937 | 63034.8 |
| glycoside hydrolase family 31 protein | LK406_09685 | Q9P999 | Negative | 2404032 - 2406272 | 85795.3 |
| calcineurin-like phosphoesterase family protein | LK406_09690 | Not Available | Negative | 2406354 - 2407859 | 56545.6 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
