Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uvrd-helicase domain-containing protein | LK406_09595 | Q53727 | Positive | 2372694 - 2375246 | 95516.9 |
| glycosyltransferase | LK406_09600 | P9WLV4 | Positive | 2375252 - 2376184 | 36169.2 |
| endonuclease iii | LK406_09605 | Q92GH4 | Positive | 2376181 - 2376843 | 24793.2 |
| sgnh/gdsl hydrolase family protein | LK406_09610 | Not Available | Positive | 2376840 - 2377616 | 29287.3 |
| dhh family phosphoesterase | LK406_09615 | Q5SM25 | Positive | 2377846 - 2378877 | 38341.1 |
| lysr family transcriptional regulator | LK406_09620 | Q55459 | Positive | 2378882 - 2379769 | 32676.3 |
| yeih family protein | LK406_09625 | Q8A6G5 | Positive | 2379899 - 2380969 | 38055.9 |
| gnat family n-acetyltransferase | LK406_09630 | O31601 | Negative | 2380978 - 2381544 | 22082.1 |
| hypothetical protein | LK406_09635 | Q5B297 | Negative | 2381661 - 2382992 | 48161.2 |
| glycoside hydrolase | LK406_09640 | Not Available | Negative | 2383005 - 2385983 | 110763.0 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
