Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc abc transporter substrate-binding protein | LK406_09395 | O05703 | Negative | 2328588 - 2329439 | 31721.7 |
| superoxide dismutase | LK406_09400 | Not Available | Negative | 2329755 - 2330054 | 11809.3 |
| superoxide dismutase | LK406_09405 | Not Available | Negative | 2330174 - 2330702 | 20088.6 |
| single-stranded-dna-specific exonuclease recj | LK406_09410 | O32044 | Negative | 2331060 - 2332826 | 65611.4 |
| lipoyl(octanoyl) transferase lipb | LK406_09415 | Q64UP8 | Negative | 2332986 - 2333696 | 25676.8 |
| lipoyl synthase | LK406_09420 | A6LE09 | Negative | 2333699 - 2334580 | 32933.8 |
| arac family transcriptional regulator | LK406_09425 | A4WG91 | Negative | 2335206 - 2336132 | 36156.2 |
| hypothetical protein | LK406_09430 | Not Available | Negative | 2336281 - 2337294 | 35410.6 |
| ribonuclease hii | LK406_09435 | A6L046 | Positive | 2337359 - 2337958 | 22698.1 |
| biopolymer transporter exbd | LK406_09440 | Not Available | Negative | 2338010 - 2338471 | 17125.1 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
