Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | LK406_09345 | Q980D9 | Positive | 2315136 - 2316365 | 47115.0 |
| duf3408 domain-containing protein | LK406_09350 | Not Available | Negative | 2316662 - 2317159 | 18941.6 |
| superoxide dismutase | LK406_09355 | Not Available | Positive | 2317615 - 2318024 | 15700.8 |
| site-specific integrase | LK406_09360 | Q8TZV9 | Positive | 2318125 - 2319330 | 45990.8 |
| duf3575 domain-containing protein | LK406_09365 | Not Available | Positive | 2320605 - 2321699 | 41609.7 |
| duf5119 domain-containing protein | LK406_09370 | Not Available | Positive | 2321696 - 2322685 | 36312.0 |
| fimbrillin family protein | LK406_09375 | A6L3B5 | Positive | 2322730 - 2323812 | 38923.6 |
| fimbrillin family protein | LK406_09380 | Not Available | Positive | 2323928 - 2324953 | 37300.5 |
| duf4906 domain-containing protein | LK406_09385 | Not Available | Positive | 2324959 - 2327748 | 103363.0 |
| abc transporter atp-binding protein | LK406_09390 | Q9WXX8 | Negative | 2327812 - 2328591 | 28779.6 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
