Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | LK406_09295 | Q9Z7N9 | Negative | 2300795 - 2302165 | 49141.4 |
| glycerophosphodiester phosphodiesterase family protein | LK406_09300 | P54527 | Negative | 2302170 - 2303087 | 33440.6 |
| duf6528 family protein | LK406_09305 | Not Available | Negative | 2303185 - 2304873 | 60536.2 |
| sugar phosphate isomerase/epimerase | LK406_09310 | Q58707 | Negative | 2304866 - 2305762 | 33734.7 |
| fibronectin type iii domain-containing protein | LK406_09315 | Q99715 | Negative | 2305772 - 2307793 | 72144.8 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_09320 | T2KN63 | Negative | 2307818 - 2309206 | 52446.8 |
| tonb-dependent receptor | LK406_09325 | T2KPJ3 | Negative | 2309225 - 2312644 | 126136.0 |
| fecr domain-containing protein | LK406_09330 | P23485 | Negative | 2312746 - 2313723 | 37565.1 |
| bacon domain-containing protein | LK406_09335 | Not Available | Negative | 2313752 - 2314099 | 12042.2 |
| rna polymerase sigma-70 factor | LK406_09340 | Q06909 | Positive | 2314287 - 2314838 | 21297.6 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
