Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pkd domain-containing protein | LK406_09245 | Not Available | Positive | 2288500 - 2289453 | 35194.1 |
| hypothetical protein | LK406_09250 | Q18DN4 | Positive | 2289475 - 2292162 | 90787.7 |
| glycoside hydrolase family protein | LK406_09255 | Not Available | Positive | 2292188 - 2293090 | 34025.4 |
| beta-glucuronidase | LK406_09260 | T2KPJ7 | Positive | 2293105 - 2294907 | 69589.4 |
| glycoside hydrolase family 5 protein | LK406_09265 | A3DJ77 | Positive | 2294904 - 2296148 | 47603.4 |
| duf4136 domain-containing protein | LK406_09270 | Not Available | Positive | 2296347 - 2296988 | 24521.6 |
| porin family protein | LK406_09275 | Not Available | Positive | 2297015 - 2297641 | 23026.5 |
| class i sam-dependent methyltransferase | LK406_09280 | Q8KZ94 | Positive | 2297798 - 2298577 | 28913.6 |
| aldo/keto reductase | LK406_09285 | Q46851 | Negative | 2298645 - 2299649 | 37637.7 |
| sgnh/gdsl hydrolase family protein | LK406_09290 | Not Available | Negative | 2299716 - 2300798 | 40027.0 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
