Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase family protein | LK406_09195 | O26223 | Negative | 2275658 - 2276188 | 19100.9 |
| haloacid dehalogenase-like hydrolase | LK406_09200 | O51040 | Positive | 2276266 - 2277105 | 31738.9 |
| hypothetical protein | LK406_09205 | Not Available | Positive | 2277107 - 2277688 | 20870.9 |
| atp-binding cassette domain-containing protein | LK406_09210 | Q8XXY9 | Positive | 2277675 - 2278325 | 23504.7 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | LK406_09215 | Q64MG2 | Positive | 2278351 - 2278932 | 21240.9 |
| gfo/idh/moca family oxidoreductase | LK406_09220 | T2KNC8 | Positive | 2278937 - 2279914 | 35596.7 |
| gtp cyclohydrolase i fole | LK406_09225 | Q8A0U0 | Positive | 2279934 - 2280542 | 23328.4 |
| hypothetical protein | LK406_09230 | Not Available | Negative | 2280583 - 2283420 | 106212.0 |
| tonb-dependent receptor | LK406_09235 | T2KPJ3 | Positive | 2283708 - 2286818 | 112256.0 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_09240 | T2KN63 | Positive | 2286837 - 2288480 | 60598.0 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
