Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | LK406_09095 | T2KPJ3 | Negative | 2241514 - 2244663 | 117006.0 |
| l-fucose isomerase | LK406_09100 | Q64ZS4 | Negative | 2244698 - 2246473 | 65512.7 |
| glycoside hydrolase family 32 protein | LK406_09105 | P05656 | Negative | 2246493 - 2248238 | 65427.2 |
| vcbs repeat-containing protein | LK406_09110 | Not Available | Negative | 2248257 - 2250215 | 72541.2 |
| duf1735 domain-containing protein | LK406_09115 | Not Available | Negative | 2250230 - 2250802 | 20654.8 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_09120 | T2KN63 | Negative | 2250849 - 2252552 | 63365.1 |
| tonb-dependent receptor | LK406_09125 | T2KPJ3 | Negative | 2252557 - 2255607 | 113561.0 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_09130 | T2KPM5 | Negative | 2255640 - 2257466 | 68678.6 |
| tonb-dependent receptor | LK406_09135 | T2KPJ3 | Negative | 2257485 - 2260619 | 115922.0 |
| hypothetical protein | LK406_09140 | Q9RQ13 | Negative | 2260808 - 2260996 | 6810.0 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
