Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinolinate synthase nada | LK406_09045 | Q8DM90 | Negative | 2225372 - 2226313 | 34410.5 |
| mrp/nbp35 family atp-binding protein | LK406_09050 | O66946 | Negative | 2226702 - 2227754 | 37622.6 |
| signal peptide peptidase sppa | LK406_09055 | P73689 | Positive | 2227920 - 2229686 | 63864.9 |
| vcbs repeat-containing protein | LK406_09060 | Not Available | Negative | 2229755 - 2231767 | 74119.5 |
| sialate o-acetylesterase | LK406_09065 | P82450 | Negative | 2231777 - 2233651 | 68652.3 |
| glycoside hydrolase | LK406_09070 | Not Available | Negative | 2233667 - 2235277 | 60681.8 |
| glycoside hydrolase | LK406_09075 | Not Available | Negative | 2235283 - 2236875 | 58052.6 |
| duf5017 domain-containing protein | LK406_09080 | Not Available | Negative | 2236899 - 2238836 | 70537.1 |
| duf5017 domain-containing protein | LK406_09085 | Not Available | Negative | 2238849 - 2239847 | 36995.8 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_09090 | T2KN63 | Negative | 2239869 - 2241494 | 61225.9 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
