Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| patatin-like phospholipase family protein | LK406_08995 | O34731 | Negative | 2210152 - 2212449 | 86618.6 |
| phenylalanine--trna ligase subunit alpha | LK406_09000 | A6LA92 | Positive | 2212526 - 2213551 | 38780.6 |
| tetratricopeptide repeat protein | LK406_09005 | Q8IUR5 | Positive | 2213565 - 2215355 | 68131.1 |
| peptidoglycan dd-metalloendopeptidase family protein | LK406_09010 | Not Available | Positive | 2215362 - 2216480 | 42406.9 |
| rrna maturation rnase ybey | LK406_09015 | Q8A2M2 | Positive | 2216538 - 2216975 | 17047.2 |
| hypothetical protein | LK406_09020 | Not Available | Positive | 2216986 - 2217879 | 33605.5 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | LK406_09025 | A6KZP0 | Positive | 2217876 - 2219834 | 73117.3 |
| branched-chain amino acid aminotransferase | LK406_09030 | Q9ZJF1 | Negative | 2219944 - 2220957 | 37451.9 |
| methionine--trna ligase | LK406_09035 | A6LFP0 | Negative | 2221007 - 2223049 | 76444.5 |
| s46 family peptidase | LK406_09040 | A6L2J8 | Negative | 2223203 - 2225299 | 78049.1 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
