Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | LK406_08945 | T2KPJ3 | Negative | 2192947 - 2196135 | 116742.0 |
| beta-n-acetylhexosaminidase | LK406_08950 | P49008 | Negative | 2196390 - 2198024 | 60491.4 |
| rok family protein | LK406_08955 | Q9X1I0 | Negative | 2198034 - 2198855 | 29568.6 |
| metallophosphoesterase family protein | LK406_08960 | Q9FMK9 | Negative | 2198852 - 2199868 | 37549.8 |
| glycoside hydrolase | LK406_08965 | P94250 | Negative | 2199880 - 2201496 | 62476.8 |
| alkaline phosphatase | LK406_08970 | P19406 | Negative | 2201503 - 2203434 | 70607.7 |
| endonuclease/exonuclease/phosphatase family protein | LK406_08975 | Q5B778 | Negative | 2203448 - 2204287 | 31007.7 |
| gh92 family glycosyl hydrolase | LK406_08980 | O86365 | Negative | 2204295 - 2207177 | 106157.0 |
| dna-binding transcriptional regulator | LK406_08985 | P45043 | Positive | 2207387 - 2208571 | 44759.6 |
| glycoside hydrolase family 125 protein | LK406_08990 | Q10449 | Positive | 2208699 - 2210090 | 52373.5 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
