Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LK406_08895 | Not Available | Negative | 2178867 - 2179076 | 7609.18 |
| sigma-54 dependent transcriptional regulator | LK406_08900 | P14375 | Negative | 2179304 - 2180659 | 48779.5 |
| hybrid sensor histidine kinase/response regulator | LK406_08905 | P26762 | Negative | 2180664 - 2183108 | 89377.0 |
| atp-binding cassette domain-containing protein | LK406_08910 | C0SPB4 | Positive | 2183297 - 2184217 | 34568.8 |
| abc transporter permease | LK406_08915 | O07523 | Positive | 2184230 - 2185552 | 49191.3 |
| phosphoglycerate kinase | LK406_08920 | Q8A753 | Positive | 2185662 - 2186924 | 45035.5 |
| m13 family metallopeptidase | LK406_08925 | Q4PZA2 | Positive | 2187121 - 2189115 | 74296.4 |
| hypothetical protein | LK406_08930 | Not Available | Negative | 2189577 - 2190410 | 30035.4 |
| endonuclease/exonuclease/phosphatase family protein | LK406_08935 | Not Available | Negative | 2190448 - 2191275 | 30572.4 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_08940 | T2KN63 | Negative | 2191300 - 2192934 | 61495.7 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
