Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ftsw/roda/spove family cell cycle protein | LK406_08845 | D7AEL2 | Negative | 2165677 - 2167032 | 50230.8 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | LK406_08850 | Q5LIJ5 | Negative | 2167052 - 2168401 | 48709.5 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | LK406_08855 | A6H198 | Negative | 2168403 - 2169647 | 45557.0 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | LK406_08860 | A6L075 | Negative | 2169761 - 2171215 | 52619.1 |
| pasta domain-containing protein | LK406_08865 | G3XD46 | Negative | 2171217 - 2173475 | 84867.5 |
| hypothetical protein | LK406_08870 | Not Available | Negative | 2173482 - 2173997 | 20838.6 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | LK406_08875 | A6LEV0 | Negative | 2174144 - 2175064 | 33945.7 |
| acyltransferase | LK406_08880 | Not Available | Positive | 2175158 - 2175985 | 32252.4 |
| gnat family n-acetyltransferase | LK406_08885 | Not Available | Positive | 2176014 - 2177021 | 39269.2 |
| sialyltransferase | LK406_08890 | Not Available | Positive | 2177173 - 2178687 | 56250.6 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
