Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose 4-epimerase gale | LK406_08745 | P55180 | Positive | 2123416 - 2124444 | 37404.7 |
| sialate o-acetylesterase | LK406_08750 | P70665 | Negative | 2124509 - 2126458 | 72234.4 |
| family 78 glycoside hydrolase catalytic domain | LK406_08755 | T2KPL4 | Negative | 2126474 - 2129152 | 99150.6 |
| glycoside hydrolase | LK406_08760 | T2KM26 | Negative | 2129277 - 2131694 | 91383.8 |
| family 78 glycoside hydrolase catalytic domain | LK406_08765 | T2KNB2 | Negative | 2131714 - 2134062 | 87226.6 |
| beta-glucosidase bglx | LK406_08770 | Q56078 | Negative | 2134074 - 2136332 | 82212.0 |
| hypothetical protein | LK406_08775 | Not Available | Negative | 2136386 - 2136661 | 10106.8 |
| right-handed parallel beta-helix repeat-containing protein | LK406_08780 | P0DW93 | Negative | 2136624 - 2138078 | 51563.0 |
| glycoside hydrolase family 2 | LK406_08785 | T2KNA8 | Negative | 2138102 - 2141248 | 117389.0 |
| duf4982 domain-containing protein | LK406_08790 | A7LXS9 | Negative | 2141337 - 2143820 | 93457.6 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
