Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphogluconolactonase | LK406_08695 | B1YJ30 | Positive | 2110956 - 2111732 | 28587.3 |
| substrate-binding domain-containing protein | LK406_08700 | P58258 | Positive | 2111777 - 2112829 | 40285.1 |
| comec family competence protein | LK406_08705 | P39695 | Positive | 2112858 - 2114336 | 52528.7 |
| class i sam-dependent methyltransferase | LK406_08710 | B6J489 | Positive | 2114333 - 2115478 | 42220.8 |
| yihy/virulence factor brkb family protein | LK406_08715 | A3N3P2 | Positive | 2115509 - 2116813 | 49276.1 |
| duf2520 domain-containing protein | LK406_08720 | Not Available | Positive | 2116927 - 2117706 | 28117.9 |
| had hydrolase family protein | LK406_08725 | Q8ZB47 | Positive | 2117682 - 2118227 | 19872.8 |
| duf4981 domain-containing protein | LK406_08730 | Q56307 | Positive | 2118265 - 2121378 | 118152.0 |
| lrp/asnc ligand binding domain-containing protein | LK406_08735 | P44337 | Negative | 2121438 - 2121908 | 17750.0 |
| glycine c-acetyltransferase | LK406_08740 | P0AB78 | Negative | 2121917 - 2123104 | 43404.5 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
