Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LK406_08595 | Not Available | Positive | 2086213 - 2088564 | 86101.5 |
| hypothetical protein | LK406_08600 | Not Available | Positive | 2088567 - 2088833 | 10242.3 |
| clp protease clpp | LK406_08605 | Q5NNY8 | Positive | 2088830 - 2089699 | 31337.5 |
| hypothetical protein | LK406_08610 | Not Available | Positive | 2089796 - 2090773 | 36662.2 |
| phage portal protein | LK406_08615 | P51717 | Positive | 2090846 - 2092072 | 46244.5 |
| hypothetical protein | LK406_08620 | Not Available | Positive | 2092069 - 2092542 | 17226.5 |
| phage holin family protein | LK406_08625 | Not Available | Positive | 2092517 - 2092942 | 15631.1 |
| structural protein p5 | LK406_08630 | Q9XJR2 | Positive | 2092935 - 2093336 | 14931.7 |
| duf5009 domain-containing protein | LK406_08635 | Q3UDW8 | Negative | 2093386 - 2094564 | 43465.0 |
| glycoside hydrolase family 18 protein | LK406_08640 | E9ERT9 | Negative | 2094577 - 2095626 | 37710.4 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
