Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosome-binding factor rbfa | LK406_08545 | A0M6N1 | Negative | 2075698 - 2076039 | 13188.8 |
| port family protein | LK406_08550 | Not Available | Negative | 2076052 - 2076861 | 31081.8 |
| ig-like domain-containing protein | LK406_08555 | Not Available | Negative | 2076863 - 2078896 | 77700.0 |
| hypothetical protein | LK406_08560 | Not Available | Negative | 2078893 - 2079867 | 36162.1 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | LK406_08565 | B2RI92 | Negative | 2079875 - 2080366 | 18089.6 |
| dna polymerase iii subunit delta | LK406_08570 | P37540 | Negative | 2080370 - 2081515 | 42774.4 |
| oligosaccharide flippase family protein | LK406_08575 | Not Available | Negative | 2081517 - 2082989 | 54379.5 |
| magnesium and cobalt transport protein cora | LK406_08580 | Q7M9C0 | Negative | 2083205 - 2084188 | 38016.1 |
| abc transporter substrate-binding protein | LK406_08585 | Not Available | Negative | 2084257 - 2084814 | 19991.9 |
| hypothetical protein | LK406_08590 | Not Available | Positive | 2085173 - 2086222 | 36637.3 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
