Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ygiq family radical sam protein | LK406_08495 | Q8AB57 | Positive | 2065991 - 2067769 | 66792.3 |
| putative sulfate exporter family transporter | LK406_08500 | Q7ULI3 | Negative | 2067940 - 2069217 | 45924.0 |
| opro/oprp family phosphate-selective porin | LK406_08505 | Not Available | Negative | 2069229 - 2070284 | 39597.3 |
| hypothetical protein | LK406_08510 | Not Available | Negative | 2070405 - 2070779 | 13792.7 |
| dna repair protein reco | LK406_08515 | Q8A275 | Negative | 2070815 - 2071540 | 27444.2 |
| 50s ribosomal protein l11 methyltransferase | LK406_08520 | P60093 | Negative | 2071537 - 2072367 | 29529.1 |
| site-specific tyrosine recombinase xerd | LK406_08525 | Q71Y59 | Positive | 2072438 - 2073334 | 34581.9 |
| cytosine deaminase | LK406_08530 | Not Available | Negative | 2073343 - 2073696 | 12609.2 |
| duf4296 domain-containing protein | LK406_08535 | Not Available | Negative | 2073656 - 2074483 | 31728.9 |
| abc transporter permease | LK406_08540 | P44250 | Negative | 2074485 - 2075690 | 43166.6 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
